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Software for Advanced MS Data Analysis


Compound Discoverer™ Software

Streamline and customize high-resolution accurate-mass data analysis with Thermo Scientific™ Compound Discoverer™ small molecule identification software. Compound Discoverer simplifies and reduces processing clicks, enabling you to go from analysis to insight faster. Fully customizable node-based workflows, integrated compound identification capabilities, and statistical analysis streamline data analyses to deliver confident results to drive your decision making.

Mass Frontier Spectral Interpretation Software

Transform your mass spectral data into knowledge quickly and easily using Thermo Scientific™ Mass Frontier™ spectral interpretation software. Take the challenge out of small molecule structural elucidation for metabolism, metabolomics, forensics, natural products, impurities, and degradants studies. High-quality, curated experimental spectral and fragmentation libraries simplify the deconvolution, evaluation, interpretation and management of infusion, and LC, nominal mass, or high resolution mass spectral data. Mass Frontier software complements Thermo Scientific™ Compound Discoverer™ software for routine-based small molecule discovery and identification.

Proteome Discoverer™ Software

Identify and quantify proteins in complex biological samples using Thermo Scientific™ Proteome Discoverer™ software. Proteome Discoverer software simplifies a wide range of proteomics workflows, from protein and peptide identification to PTM analysis to isobaric mass tagging and both SILAC and label-free quantitation. It supports multiple database search algorithms (SEQUEST, Z-Core, Mascot, and Byonic) and multiple dissociation techniques (CID, HCD, ETD, and EThcD) for more comprehensive analyses.

ProSightPC Software

Perform comprehensive analysis of top-down and middle-down proteomics data with Thermo Scientific™ ProSightPC™ and Thermo Scientific™ ProSightPD™ software. These tools feature robust proteomic search engines for proteoform characterization, including proteoforms with unknown PTMs or truncations. ProSightPC software accommodates proteomic data generated by fragmentation techniques present in any Thermo Scientific mass spectrometers. ProSightPC software is the only proteomics software that allows the user to easily search MS/MS data against proteome warehouses containing the complete biological complexity found in UniProt.

ToxFinder™ Software

Clinical researchers and forensic toxicologists no longer have to choose between optimum results and ease of use. Thermo Scientific™ ToxFinder™ software delivers highly accurate screening and semiquantitative analysis from either triple quadrupole or high-resolution, accurate-mass mass spectrometer data. Its experiment-specific workflows simplify operation by displaying only the features and parameters required for the experiment type selected. Data review is simple, yet powerful while the custom report designer provides WYSISYG customization.

LipidSearch™ Software

Lipidomics is crucial to understanding cellular physiology and pathology, and lipid profiling for disease phenotype analysis is a rapidly growing area in translational medical research. LC/MS is a powerful technique for the identification and quantitation of cellular lipids. The Thermo Scientific™ LipidSearch™ Software processes LC-MS data, including the high-resolution accurate-mass data generated by Thermo Scientific™ Orbitrap™-based mass spectrometers, to make provide accurate lipid identification. It automatically integrates complex data into reports and dramatically reduces data analysis time. 

BioPharma Finder™ Software

Save time and identify more with Thermo Scientific™ BioPharma Finder™ software. Screen, identify, and characterize intact proteins with higher productivity and confidence. Confirm amino acid sequence, and identify relative amounts of known/unknown post-translational modifications (PTMs) using the Peptide Mapping workflow. Enable efficient sequence verification, along with identification and localization of modifications by using the automated top-down workflow. All BioPharma Finder software workflows take full advantage of the high-quality, HRAM data produced by Thermo Scientific™ Orbitrap™ mass analyzers.

Liquid Chromatography
Ion Chromatography
Gas Chromatography
Chromatography Sample Preparation
Chromatography Software
Chromatography Columns and Consumables
LC MS – Liquid Chromatography Mass Spectrometry
GC MS - Gas Chromatography Mass Spectrometry
IC-MS – Ion Chromatography Mass Spectrometry
ICP-MS – Inductively Coupled Plasma Mass Spectrometry
IRMS - Isotope ratio Mass spectrometry
GD-MS – Glow Discharge Mass Spectrometry
Process Mass Spectrometry
MS Software – Mass Spectrometry Software
Infrared Spectrometers and Microscopes FT-IR
Near Infrared Analyzers NIR
Raman Spectrometers and Microscopes
Portable Spectrometers for Identification
Bench Top NMR Spectrometers
UV-VIS Spectrophotometers
DIA – Complex analyzers
Pharamaceutical Testing Equipment
Laboratory Systems for Pure and UltraPure Water
Gas Generators
Laboratory Equipment

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